IEEE/ACM Transactions on Computational Biology and Bioinformatics https://www.computer.org/csdl/journal/tb The IEEE/ACM Transactions on Computational Biology and Bioinformatics is a new quarterly that will publish archival research results related to the algorithmic, mathematical, statistical, and computational methods that are central in bioinformatics and computational biology; the development and testing of effective computer programs in bioinformatics; the development and optimization of biological databases; and important biological results that are obtained from the use of these methods, programs, and databases. en-us https://s3.amazonaws.com/ieeecs.cdn.common/images/computer.org/CSLogo_dark.png IEEE Computer Society Digital Library List of 100 recently published journal articles. https://www.computer.org/csdl TMELand: An End-to-End Pipeline for Quantification and Visualization of Waddington&#x0027;s Epigenetic Landscape Based on Gene Regulatory Network https://www.computer.org/csdl/journal/tb/2024/06/10149510/1NWy9UD1uEM 12/13/2024 8:31 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2023.3285395 A Multi-Task Deep Feature Selection Method for Brain Imaging Genetics https://www.computer.org/csdl/journal/tb/2024/06/10177993/1OH1r65fTAk 12/13/2024 8:51 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2023.3294413 FaStaNMF: A Fast and Stable Non-Negative Matrix Factorization for Gene Expression https://www.computer.org/csdl/journal/tb/2024/06/10187695/1OUiEP7W7f2 12/13/2024 8:08 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2023.3296979 Hybrid Causal Feature Selection for Cancer Biomarker Identification From RNA-Seq Data https://www.computer.org/csdl/journal/tb/2024/06/10541056/1XlsRE9Ee52 12/13/2024 8:33 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3406922 Exploring Combined Effects of DNA Methylation and Copy Number on Gene Expression With a Two-Stage Approach https://www.computer.org/csdl/journal/tb/2024/06/10541058/1XlsRtbfJio 12/13/2024 8:32 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3406969 Dock2D: Synthetic Data for the Molecular Recognition Problem https://www.computer.org/csdl/journal/tb/2024/06/10542378/1XmMpKZmGvS 12/13/2024 8:52 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3407477 RGCNPPIS: A Residual Graph Convolutional Network for Protein-Protein Interaction Site Prediction https://www.computer.org/csdl/journal/tb/2024/06/10551454/1XyK6pI69AQ 12/13/2024 8:24 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3410350 CrossPredGO: A Novel Light-Weight Cross-Modal Multi-Attention Framework for Protein Function Prediction https://www.computer.org/csdl/journal/tb/2024/06/10551553/1XyK6yrGNLW 12/13/2024 8:29 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3410696 Transcription Factor Binding Site Prediction Using CnNet Approach https://www.computer.org/csdl/journal/tb/2024/06/10552097/1XAoZm6QRZC 12/13/2024 8:40 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3411024 Prediction of Inter-Residue Multiple Distances and Exploration of Protein Multiple Conformations by Deep Learning https://www.computer.org/csdl/journal/tb/2024/06/10552364/1XFnGLfe19K 01/15/2025 3:01 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3411825 Distantly Supervised Biomedical Relation Extraction via Negative Learning and Noisy Student Self-Training https://www.computer.org/csdl/journal/tb/2024/06/10553239/1XH2AYKXfdm 12/13/2024 8:21 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3412174 Novel Antimicrobial Peptide Design Using Motif Match Score Representation https://www.computer.org/csdl/journal/tb/2024/06/10555377/1XIHvhnKpz2 12/13/2024 8:31 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3413021 PRFold-TNN: Protein Fold Recognition With an Ensemble Feature Selection Method Using PageRank Algorithm Based on Transformer https://www.computer.org/csdl/journal/tb/2024/06/10557618/1XLFSFXeCKA 12/13/2024 8:11 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3414497 SIG: Graph-Based Cancer Subtype Stratification With Gene Mutation Structural Information https://www.computer.org/csdl/journal/tb/2024/06/10557653/1XLFT4d5rSo 12/13/2024 8:43 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3414498 SAGCN: Using Graph Convolutional Network With Subgraph-Aware for circRNA-Drug Sensitivity Identification https://www.computer.org/csdl/journal/tb/2024/06/10559405/1XR0cPYv3va 12/13/2024 8:26 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3415058 Recursive Self-Composite Approach Toward Structural Understanding of Boolean Networks https://www.computer.org/csdl/journal/tb/2024/06/10559414/1XR0cKdYS88 12/13/2024 8:18 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3415352 Calculation of the Weight of Evidence for Combined Single-Cell and Extracellular Forensic DNA https://www.computer.org/csdl/journal/tb/2024/06/10564113/1XTYmmgDclO 12/13/2024 8:09 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3416877 Intra-Inter Graph Representation Learning for Protein-Protein Binding Sites Prediction https://www.computer.org/csdl/journal/tb/2024/06/10564575/1XTYmt3iJ7q 04/15/2025 3:00 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3416341 SeedHit: A GPU Friendly Pre-Align Filtering Algorithm https://www.computer.org/csdl/journal/tb/2024/06/10568393/1XXiaCJwEwg 12/13/2024 8:46 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3417517 Analyzing Large-Scale Single-Cell RNA-Seq Data Using Coreset https://www.computer.org/csdl/journal/tb/2024/06/10569081/1Y2gSVMAPgk 12/13/2024 8:35 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3418078 BLAM6A-Merge: Leveraging Attention Mechanisms and Feature Fusion Strategies to Improve the Identification of RNA N6-Methyladenosine Sites https://www.computer.org/csdl/journal/tb/2024/06/10570286/1Y2gSNVdyVy 01/15/2025 3:01 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3418490 Tropical Density Estimation of Phylogenetic Trees https://www.computer.org/csdl/journal/tb/2024/06/10577088/1Y9g04F9psc 12/13/2024 8:19 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3420815 Haplotype Frequency Inference From Pooled Genetic Data With a Latent Multinomial Model https://www.computer.org/csdl/journal/tb/2024/06/10577257/1Y9g0boHlN6 12/13/2024 8:36 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3420430 Ense-i6mA: Identification of DNA N<sup>6</sup>-Methyladenine Sites Using XGB-RFE Feature Selection and Ensemble Machine Learning https://www.computer.org/csdl/journal/tb/2024/06/10578011/1YeeFIfd96w 12/13/2024 8:17 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3421228 Optimal Structured Matrix Approximation for Robustness to Incomplete Biosequence Data https://www.computer.org/csdl/journal/tb/2024/06/10578337/1YeeFWGcodW 12/13/2024 8:27 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3420903 Prediction of Potential miRNA-Disease Associations Based on a Masked Graph Autoencoder https://www.computer.org/csdl/journal/tb/2024/06/10582305/1YfTz4NTOJW 12/13/2024 8:10 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3421924 Graph Convolutional Network With Self-Supervised Learning for Brain Disease Classification https://www.computer.org/csdl/journal/tb/2024/06/10582853/1YfTzbskYJG 12/13/2024 8:12 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3422152 Improved Fuzzy Cognitive Maps for Gene Regulatory Networks Inference Based on Time Series Data https://www.computer.org/csdl/journal/tb/2024/06/10585316/1YiRUW7giv6 12/13/2024 8:41 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3423383 SCRN: Single-Cell Gene Regulatory Network Identification in Alzheimer&#x0027;s Disease https://www.computer.org/csdl/journal/tb/2024/06/10588994/1YpQZi1Ruxy 12/13/2024 8:19 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3424400 <italic>Bi-SeqCNN:</italic> A Novel Light-Weight Bi-Directional CNN Architecture for Protein Function Prediction https://www.computer.org/csdl/journal/tb/2024/06/10595435/1YuPKKARv2M 12/13/2024 8:32 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3426491 MOTHER-DB: A Database for Sharing Nonhuman Ovarian Histology Images https://www.computer.org/csdl/journal/tb/2024/06/10596953/1Yw9dvGk5gI 12/13/2024 8:24 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3426999 Employing Machine Learning Techniques to Detect Protein Function: A Survey, Experimental, and Empirical Evaluations https://www.computer.org/csdl/journal/tb/2024/06/10598224/1YBtoBtTOOA 12/13/2024 8:55 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3427381 Enhancing Generalizability in Biomedical Entity Recognition: Self-Attention PCA-CLS Model https://www.computer.org/csdl/journal/tb/2024/06/10599831/1YD8cZUJchW 12/13/2024 8:48 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3429234 Dopcc: Detecting Overlapping Protein Complexes via Multi-Metrics and Co-Core Attachment Method https://www.computer.org/csdl/journal/tb/2024/06/10601321/1YErGn3zBG8 12/13/2024 8:05 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3429546 Generative Adversarial Network-Based Augmentation With Noval 2-Step Authentication for Anti-Coronavirus Peptide Prediction https://www.computer.org/csdl/journal/tb/2024/06/10605913/1YMKcrzQRZS 12/13/2024 8:42 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3431688 dwMLCS: An Efficient MLCS Algorithm Based on Dynamic and Weighted Directed Acyclic Graph https://www.computer.org/csdl/journal/tb/2024/06/10606065/1YMKckNKxuo 12/13/2024 8:38 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3431558 Machine Learning-Assisted High-Throughput Screening for Anti-MRSA Compounds https://www.computer.org/csdl/journal/tb/2024/06/10609973/1YTJiwZjA9a 12/13/2024 8:51 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3434340 HGLA: Biomolecular Interaction Prediction Based on Mixed High-Order Graph Convolution With Filter Network via LSTM and Channel Attention https://www.computer.org/csdl/journal/tb/2024/06/10612223/1YTJim3bSp2 12/13/2024 8:30 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3434399 Diffusing on Two Levels and Optimizing for Multiple Properties: A Novel Approach to Generating Molecules With Desirable Properties https://www.computer.org/csdl/journal/tb/2024/06/10612764/1YTJi8PZx0Q 12/13/2024 8:27 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3434461 KGRLFF: Detecting Drug-Drug Interactions Based on Knowledge Graph Representation Learning and Feature Fusion https://www.computer.org/csdl/journal/tb/2024/06/10613488/1YYHYwZ7oDm 12/13/2024 8:26 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3434992 Hyb_SEnc: An Antituberculosis Peptide Predictor Based on a Hybrid Feature Vector and Stacked Ensemble Learning https://www.computer.org/csdl/journal/tb/2024/06/10616381/1Z21MXdbE7m 12/13/2024 8:10 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3425644 DMAMP: A Deep-Learning Model for Detecting Antimicrobial Peptides and Their Multi-Activities https://www.computer.org/csdl/journal/tb/2024/06/10623875/1ZbDKnFvmAU 12/13/2024 8:25 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3439541 AGML: Adaptive Graph-Based Multi-Label Learning for Prediction of RBP and as Event Associations During EMT https://www.computer.org/csdl/journal/tb/2024/06/10633271/1ZlBc0SPLgs 12/13/2024 8:20 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3440913 Deep Learning in Gene Regulatory Network Inference: A Survey https://www.computer.org/csdl/journal/tb/2024/06/10634752/1Zng6Sv76Le 12/13/2024 8:34 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3442536 Constrained Pseudo-Time Ordering for Clinical Transcriptomics Data https://www.computer.org/csdl/journal/tb/2024/06/10634780/1Zng71ExfMc 12/13/2024 8:54 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3442669 Joint Extraction of Biomedical Events Based on Dynamic Path Planning Strategy and Hybrid Neural Network https://www.computer.org/csdl/journal/tb/2024/06/10634836/1Zng6DJp996 12/13/2024 8:17 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3442199 TeaTFactor: A Prediction Tool for Tea Plant Transcription Factors Based on BERT https://www.computer.org/csdl/journal/tb/2024/06/10637723/1ZsL6rQ5nNe 01/15/2025 3:01 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3444466 Integrating K+ Entities Into Coreference Resolution on Biomedical Texts https://www.computer.org/csdl/journal/tb/2024/06/10643354/1ZAxj9eente 01/15/2025 3:01 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3447273 KGRACDA: A Model Based on Knowledge Graph from Recursion and Attention Aggregation for CircRNA-Disease Association Prediction https://www.computer.org/csdl/journal/tb/2024/06/10643364/1ZAxj2CUNUc 12/13/2024 8:46 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3447110 Parallel Convolutional Contrastive Learning Method for Enzyme Function Prediction https://www.computer.org/csdl/journal/tb/2024/06/10643367/1ZAxiVcvqVy 11/27/2025 8:02 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3447037 A Method for Inferring Polymers Based on Linear Regression and Integer Programming https://www.computer.org/csdl/journal/tb/2024/06/10643689/1ZCxFLkRw4g 12/13/2024 8:14 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3447780 Compact Class-Conditional Attribute Category Clustering: Amino Acid Grouping for Enhanced HIV-1 Protease Cleavage Classification https://www.computer.org/csdl/journal/tb/2024/06/10645313/1ZDR7f6ReUw 12/13/2024 8:24 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3448617 Contrasting Multi-Source Temporal Knowledge Graphs for Biomedical Hypothesis Generation https://www.computer.org/csdl/journal/tb/2024/06/10654589/1ZMv6Mn8V3O 12/13/2024 8:09 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3451051 MMD-DTA: A Multi-Modal Deep Learning Framework for Drug-Target Binding Affinity and Binding Region Prediction https://www.computer.org/csdl/journal/tb/2024/06/10659152/1ZOa0SkepmU 12/13/2024 8:09 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3451985 LKLPDA: A Low-Rank Fast Kernel Learning Approach for Predicting piRNA-Disease Associations https://www.computer.org/csdl/journal/tb/2024/06/10660308/1ZPOXTAaPGU 12/13/2024 8:16 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3452055 Integrating Similarities via Local Interaction Consistency and Optimizing Area Under the Curve Measures via Matrix Factorization for Drug-Target Interaction Prediction https://www.computer.org/csdl/journal/tb/2024/06/10663944/1ZW76CAzllK 12/13/2024 8:48 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3453499 Relation Extraction in Biomedical Texts: A Cross-Sentence Approach https://www.computer.org/csdl/journal/tb/2024/06/10668810/201ri28p0TS 01/15/2025 3:01 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3451348 CTsynther: Contrastive Transformer Model for End-to-End Retrosynthesis Prediction https://www.computer.org/csdl/journal/tb/2024/06/10668817/201ri8m9SFy 12/13/2024 8:45 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3455381 Bridging Between Deviation Indices for Non-Tree-Based Phylogenetic Networks https://www.computer.org/csdl/journal/tb/2024/06/10670207/206pVqLfnI4 12/13/2024 8:21 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3456575 Combining Zhegalkin Polynomials and SAT Solving for Context-Specific Boolean Modeling of Biological Systems https://www.computer.org/csdl/journal/tb/2024/06/10671585/207Jo8b3FCg 12/13/2024 8:08 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3456302 An Automated Convergence Diagnostic for Phylogenetic MCMC Analyses https://www.computer.org/csdl/journal/tb/2024/06/10675342/207JonyeGoU 12/13/2024 8:16 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3457875 APMG: 3D Molecule Generation Driven by Atomic Chemical Properties https://www.computer.org/csdl/journal/tb/2024/06/10675370/207JoQJNuCc 01/14/2025 8:01 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3457807 Using Multi-Encoder Semi-Implicit Graph Variational Autoencoder to Analyze Single-Cell RNA Sequencing Data https://www.computer.org/csdl/journal/tb/2024/06/10675446/207JoIzGHHa 12/13/2024 8:31 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3458170 A New Graph Autoencoder-Based Multi-Level Kernel Subspace Fusion Framework for Single-Cell Type Identification https://www.computer.org/csdl/journal/tb/2024/06/10679652/20b3bR7Abok 12/13/2024 8:11 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3459960 Accurate Flow Decomposition via Robust Integer Linear Programming https://www.computer.org/csdl/journal/tb/2024/06/10680237/20cIh0SoIXC 12/13/2024 8:06 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3433523 GenoM7GNet: An Efficient N<sup>7</sup>-Methylguanosine Site Prediction Approach Based on a Nucleotide Language Model https://www.computer.org/csdl/journal/tb/2024/06/10684781/20okr6MEigo 12/13/2024 8:44 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3459870 Identification of Cancer Driver Genes based on Dynamic Incentive Model https://www.computer.org/csdl/journal/tb/2024/06/10690234/20vjtwN91Ha 12/13/2024 8:13 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3467119 Reinforced Metapath Optimization in Heterogeneous Information Networks for Drug-Target Interaction Prediction https://www.computer.org/csdl/journal/tb/2024/06/10690254/20vju6qWfjq 12/13/2024 8:52 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3467135 Improving Antifreeze Proteins Prediction With Protein Language Models and Hybrid Feature Extraction Networks https://www.computer.org/csdl/journal/tb/2024/06/10691918/20vjtDXERoc 12/13/2024 8:26 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3467261 Vina-GPU 2.1: Towards Further Optimizing Docking Speed and Precision of AutoDock Vina and Its Derivatives https://www.computer.org/csdl/journal/tb/2024/06/10693356/20wCWvRcY24 12/13/2024 8:40 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3467127 MetalPrognosis: A Biological Language Model-Based Approach for Disease-Associated Mutations in Metal-Binding Site Prediction https://www.computer.org/csdl/journal/tb/2024/06/10693361/20wCWLbgoo0 12/13/2024 8:53 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3467093 MISSH: Fast Hashing of Multiple Spaced Seeds https://www.computer.org/csdl/journal/tb/2024/06/10693556/20wCWoizehy 12/13/2024 8:28 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3467368 Incremental RPN: Hierarchical Region Proposal Network for Apple Leaf Disease Detection in Natural Environments https://www.computer.org/csdl/journal/tb/2024/06/10696974/20yDiRJA6wo 12/13/2024 8:40 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3469178 Enhancing Spatial Domain Identification in Spatially Resolved Transcriptomics Using Graph Convolutional Networks With Adaptively Feature-Spatial Balance and Contrastive Learning https://www.computer.org/csdl/journal/tb/2024/06/10696983/20AidKikOOs 12/13/2024 8:54 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3469164 A Protein-Context Enhanced Master Slave Framework for Zero-Shot Drug Target Interaction Prediction https://www.computer.org/csdl/journal/tb/2024/06/10697392/20Aid4rDwOI 12/13/2024 8:37 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3468434 Game-Theoretic Flux Balance Analysis Model for Predicting Stable Community Composition https://www.computer.org/csdl/journal/tb/2024/06/10697469/20AicXURxkI 12/13/2024 8:35 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3470592 LEC-Codec: Learning-Based Genome Data Compression https://www.computer.org/csdl/journal/tb/2024/06/10704976/20JUbPk9JZK 12/13/2024 8:53 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3473899 LINgroups as a Robust Principled Approach to Compare and Integrate Multiple Bacterial Taxonomies https://www.computer.org/csdl/journal/tb/2024/06/10706828/20QTgHv4bEQ 12/13/2024 8:07 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3475917 RFLP-Inator: Interactive Web Platform for In Silico Simulation and Complementary Tools of the PCR-RFLP Technique https://www.computer.org/csdl/journal/tb/2024/06/10709661/20Sy9uvDChi 12/13/2024 8:46 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3476453 Orientation Determination of Cryo-EM Projection Images Using Reliable Common Lines and Spherical Embeddings https://www.computer.org/csdl/journal/tb/2024/06/10711260/20Ud3PQKULe 12/13/2024 8:47 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3476619 A Knowledge Graph-Based Method for Drug-Drug Interaction Prediction With Contrastive Learning https://www.computer.org/csdl/journal/tb/2024/06/10713096/20Ud3zr8XrW 12/13/2024 8:45 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3477410 <italic>De Novo</italic> Drug Design by Multi-Objective Path Consistency Learning With Beam A<sup>*</sup> Search https://www.computer.org/csdl/journal/tb/2024/06/10713175/20Ud3qWB3ag 12/13/2024 8:43 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3477592 Generative Biomedical Event Extraction With Constrained Decoding Strategy https://www.computer.org/csdl/journal/tb/2024/06/10716286/212a9D3BVny 12/13/2024 8:45 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3480088 A Comprehensive Evaluation Framework for Benchmarking Multi-Objective Feature Selection in Omics-Based Biomarker Discovery https://www.computer.org/csdl/journal/tb/2024/06/10716353/212a9NGqUhi 12/13/2024 8:54 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3480150 An End-to-End Knowledge Graph Fused Graph Neural Network for Accurate Protein-Protein Interactions Prediction https://www.computer.org/csdl/journal/tb/2024/06/10734144/21iLcUguLvO 01/15/2025 3:01 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3486216 MLW-BFECF: A Multi-Weighted Dynamic Cascade Forest Based on Bilinear Feature Extraction for Predicting the Stage of Kidney Renal Clear Cell Carcinoma on Multi-Modal Gene Data https://www.computer.org/csdl/journal/tb/2024/06/10736344/21kq5HoaanS 12/13/2024 8:50 pm PST http://doi.ieeecomputersociety.org/10.1109/TCBB.2024.3486742 Discriminative Domain Adaption Network for Simultaneously 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